Bioinformatics Software Engineer

You'll collaborate closely with scientists, engineers, and researchers, contributing your technical expertise to streamline processes, maintain automation, and drive our bioinformatics capabilities forward.

Responsibilities:

• Design, implement, and maintain robust bioinformatics pipelines using Nextflow.
• Develop and manage infrastructure on AWS to ensure scalability, reliability, and efficiency.
• Optimize computational workflows for high-performance execution and data analysis.
• Maintain and improve pipeline automation to ensure smooth operational workflows.
• Manage GitHub repositories, oversee version control, and streamline the software release process.
• Collaborate with cross-functional teams to integrate bioinformatics solutions.
• Assist in the implementation and integration of Laboratory Information Management Systems (LIMS).
• Proactively identify opportunities to enhance infrastructure efficiency and security.

Requirements

Qualifications:

• Bachelor’s degree or higher in Bioinformatics, Computational Biology, Computer Science, or a related field.
• Experience with bioinformatics workflow development and optimization, particularly using Nextflow.
• Hands-on experience with AWS cloud computing services (EC2, S3, Batch, Lambda).
• Proficiency in scripting languages (Python, Bash) and familiarity with container technologies (Docker, Kubernetes).
• Strong interest and experience in developing and managing infrastructure.
• Excellent communication and collaborative skills.

Preferred Qualifications:

• Prior experience working with Laboratory Information Management Systems (LIMS).
• Experience with infrastructure-as-code (Terraform, CloudFormation).
• Familiarity with CI/CD practices.

• Health Care Plan (Medical, Dental & Vision)
• Retirement Plan (401k, IRA)
• Paid Time Off (Vacation, Sick & Public Holidays)